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SRX3442521: Ark_Miseq
1 ILLUMINA (Illumina MiSeq) run: 26.5M spots, 4.4G bases, 2.3Gb downloads

Design: Randomly selected metagenomic fragments
Submitted by: UC Davis
Study: Metagenomic assembled genomes from two thermal pools in the Uzon Caldera, Kamchatka, Russia
show Abstracthide Abstract
In this study we focus on two hydrothermal pools, Arkashin Shurf and Zavarzin Spring, in Uzon Caldera, Kamchatka, Russia that were previously characterized using 16S ribosomal RNA sequencing and geochemical analysis undertaken in Burgess et al. 2012 (DOI: 10.1007/s00248-011-9979-4). First we produced metagenomic assembled genomes (MAGs) and then we characterized and compared them between the two pools. Hypotheses: (1) Discussion of MAG's and possible functions; novelty? (2) Comparison of Burgess 16S to metagenomes (3) Differences in functions between pools based on geochemistry.
Sample: Arkashin Metagenome or environmental sample from Bacteria
SAMN08105301 • SRS2733204 • All experiments • All runs
Library:
Name: Ark_Miseq
Instrument: Illumina MiSeq
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 26.5M spots, 4.4G bases, 2.3Gb
Run# of Spots# of BasesSizePublished
SRR634496126,454,3134.4G2.3Gb2017-12-05

ID:
4799403

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